dipper.sources.MGISlim module¶
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class
dipper.sources.MGISlim.
MGISlim
(graph_type, are_bnodes_skolemized)¶ Bases:
dipper.sources.Source.Source
slim mgi model only containing Gene to phenotype associations Uses mousemine: http://www.mousemine.org/mousemine/begin.do
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fetch
(is_dl_forced)¶ abstract method to fetch all data from an external resource. this should be overridden by subclasses :return: None
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parse
(limit=None)¶ abstract method to parse all data from an external resource, that was fetched in fetch() this should be overridden by subclasses :return: None
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